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How Do Amazon Businesses File Tax Returns?

If you are an Amazon seller, you might find yourself overwhelmed when filing taxes because of the numerous forms, options, and each state has distinct regulations.
From understanding the 1099-K tax form from Amazon to managing state and local sales taxes for Amazon sellers, the process can be daunting but manageable with the right knowledge and tools. In this guide, we will look at the best practices when it comes to filing taxes especially for your Amazon business.
Have You Noticed Amazon Seller Taxes Lately?
Like any other business, Amazon sellers must declare their income and pay taxes where necessary. FBA sales or the income earned by selling your products directly and shipping them yourself are both taxed. Here are the key components:
Income Reporting: Amazon issues a 1099-K tax form to sellers who meet specific thresholds. This form proves the total gross sales and is useful for the preparation of your income tax return.
Business Structure: The legal form of your business -sole trader, LLC, corporation- determines your tax filing. Sole proprietors typically use Form 1040 and report their business income on Schedule C.
Sales Taxes Are Your Responsibility: While Amazon collects and remits sales tax in many states under the Marketplace Tax Collection program, sellers still need to monitor and report taxes in states where they have a Sales Tax Nexus by State.
Marketplace Tax Collection and Managing State and Local Sales Taxes
It is not always easy to manage sales taxes when selling on Amazon; it becomes even more complex to manage when you are an FBA seller with your stock in different FCs.
While Marketplace Tax Collection does help to make some aspects of sales tax easier, sellers still have responsibilities to complete.
Marketplace Tax Collection; What does it mean? The MTC program means that Amazon determines and pays the due amount of commissions directly to any state that requires it to do so. In layman's terms, this means Amazon assumes a large share of the work on sales tax thus relieving the sellers of most of the workload.
But this does not mean that your work is done here!
Tracking Nexus Obligations:With Marketplace Tax Collection in place, it is possible to still find that some states claim that you have Sales Tax Nexus.
A nexus is created where you maintain a presence in the state for instance, storing your inventory with Amazon’s fulfillment centers or making a high number of sales within the state.
Another rule of thumb is: once you establish a physical presence, you have to register, collect and pay sales tax in that state.
Reporting Marketplace Collected Taxes:Although Amazon sends the collected sales tax to the state, it is obligatory on your part to disclose these amounts on your taxes as per the state laws.
Compliance with each of the states having its different reporting rules is important in order to avert penalties.
Managing sales tax on Amazon can be tricky, especially for FBA sellers, right?
While Marketplace Tax Collection takes care of a lot, you still need to track Sales Tax Nexus and report taxes as required by state laws.
Staying compliant ensures you avoid penalties and keep your business running smoothly.
What Sellers Need to Know!
From sellers’ perspective, the field of state and local sales taxes for Amazon sellers is divided into two – Marketplace Tax Collection plus nexus.
Here’s what you need to know:
Sales Tax Nexus by State:Sales tax nexus generally means a relationship between a business and a taxing state that compels the business to collect and pay sales tax.
This connection can be established through various activities, including:
- Physical Presence:
- Under current rules, establishing a nexus can occur if your business has a physical presence such as an office, store, warehouse or even if you have inventory in a particular state. In Amazon, nexus is created by storing inventory in FBA fulfillment centers within a state for sellers who are undertaking their operations within the same state.
- Economic Activity:
- Conducting a huge volume of transactions also creates a nexus in a particular state. Typically this is done based on certain sales milestones, for instance minimum dollar value of sale or a number of transactions in the state. For instance, most of the states have established their economic nexus where businesses must collect sales tax if they made sales amounting to hundred thousand dollars and if they made more than two hundred sales to the state.
The nexus being established, the business concerns are expected to obtain a permit from the state’s department of taxation, remit tax on their taxable sales and remit the same to the state. If these obligations are not met, penalties and legal issues may arise.
To learn more about the various economic nexus thresholds by state, including particularity of the sales and transaction thresholds, Sales Tax Institute has a complete guide to economic nexus by state.
Sales Tax Management Tools:To avoid complicity issues, most sellers use tools like an application for filing taxes or hire a tax accountant for Amazon sellers .
These resources assist in checking where taxes are due, make sure that these are paid in time, and collect data for reporting purposes.
When you know how Marketplace Tax Collection works with your nexus responsibilities, you will be informed on the best sales tax legal requirements to meet. In this case it therefore is vital to emphasize the need to have the right tools and personnel to reduce the risk and ensure a more streamlined process.
Basic Tax Forms Every Amazon Seller Must Understand
Knowing about the tax forms needed for your Amazon business is important. Here are the most common ones:
1- Form 1040:The schedule used by sole traders to report their personal and business income.
2- Schedule C:Outlines your business revenues, your business costs and your business profit or loss on a specific account or transaction.
3- 1099-K Tax Form from Amazon:Calculates your total gross sales and is used in submitting your incomes.
4- State Sales Tax Forms:Differ from state to state and are actually used to pay sales taxes as well as to file them.
What is Schedule C, and Why is it Important for Amazon Sellers?
For sole proprietors or freelancers, the Schedule C documents are used to show the revenue and expenditure for the business.
This form computes your taxable income and is filed together with form 1040.
Key Details to Include on Schedule C:- Gross sales income from Amazon (as shown on your 1099-K tax form from Amazon).
- Deductible expenses such as Amazon FBA fees, advertising costs, shipping, and more.
- Tax payable, the difference between gross profit and less net profit or loss.
Knowing how to complete Schedule C accurately is crucial for ensuring compliance and reducing your tax liability.
Stop wasting time on spreadsheets and start using what the professionals use.

What is a Deductible, and How Does It Help Amazon Sellers?
For Amazon sellers, tax deductions are a valuable tool that helps you in reducing taxable income and shrinking the amount of tax owed. Knowing what is a deductible and keeping detailed records of qualified expenses can save you huge sums of money annually.
Here’s a comprehensive look at key deductions you should claim.
Common Tax Deductions for FBA Sellers:- Amazon FBA Fees: Freight costs and commissions for storing and packing your products, as well as their transportation.
- Shipping Costs: Costs in relation to shipping and delivery of stock either to the Amazon fulfillment centers or to the customers.
- Office Supplies: Any item that is used in your business, for instance, labels for shipping, envelopes, or even a printer.
- Software and Tools: Subscriptions for inventory management or tax filing software.
- Professional Services: Payments to a tax accountant for Amazon sellers or legal advisors.
- Business License: Fees incurred in registering and running your business as a company.
As for the above deductions, they are straightforward and general, but there are numerous other opportunities for sellers to save money on taxes.
Here are some often-overlooked deductions that can further reduce your tax liability:
- Storage Fees:Cost incurred for holding inventory in the Amazon fulfillment centers. This entails charges for monthly storage besides charges for long term storage.
- Advertising Costs:Any investment made with the purpose to advertise your Amazon listings, for example using PPC or social media advertising.
- Educational Resources:Such as the cost of the course, training, or tool that enables you to improve how your business works and manages to operate.
- Profit Tracking Tools:Tools such as Profit Cyclops which help to calculate the overall true rate of profitability besides seeing opportunities to improve on.
Understanding what is a deductible can save you thousands of dollars in taxes annually. Well-organized and complete records of all the expenses are important for justifiable purposes and legitimate reduction.
Why Deductions Matter for Amazon Sellers?
Taking advantage of all eligible deductions is essential for reducing taxable income and improving profitability.
Keeping detailed records of your expenses—categorized by type—is vital for justifying deductions during tax filing and in case of an audit.
By organizing your deductions into standard and additional categories, you ensure no savings opportunities are missed. Combine this knowledge with the use of profit tracking tools like Profit Cyclops to maintain accurate financial records and optimize your tax strategy.
Filing Amazon Seller Taxes: A Step-by-Step Guide
Let’s break down the process of filing Amazon seller taxes into simple steps:
1- Gather Financial Records:Collect all reports from Amazon, including gross sales data from the 1099-K tax form from Amazon. Make sure you also keep other documents that relate to fees, refunds, other charges and the likes.
2- Categorize Your Expenses:Follow on the deductible expense, Amazon FBA taxes, shipping cost, and professional fee.
3- Use Tax Filing Software:For calculations use the available tax tools such as TurboTax or H&R Block in order to save time and be on the right side of the law. They can also help generate forms like Schedule C.
4- Consult a Professional:If your tax situation is complex, hiring a tax accountant for Amazon sellers can save you time and ensure compliance.
5- File on Time:File your tax return by the end of the fiscal year (normally April 15th, if you do not request a tax extension) in accordance with the IRS.
What difficulties do Amazon Sellers face when it comes to their taxes?
As an Amazon seller, dealing with filing of tax returns has its own unique hitches.
Some common issues include:
- Managing Multiple State Taxes:
- Knowing where you have a Sales Tax Nexus by State can be tricky, especially for FBA sellers with inventory in different locations.
- Tracking Deductions:
- Record maintenance of deductible expenses takes time and calling for some level of organization.
- Understanding Complex Tax Laws:
- There is a big difference from one state to another as well as differing business structures which makes it even more complicated.
How to overcome these difficulties?
Using tools like tax filing software or consulting a tax accountant for Amazon sellers can help navigate these challenges:
Using a Tax Filing software
Taxes for Amazon sellers is like juggling; you have many elements on the plate: income, expenses, deductions, and taxes from different states.
This is where the tax filing software comes handy. These tools help here to reduce the amount of time to spend along with minimizing the amount of time that would be spent making several mistakes that may lead to more costs/penalties being incurred.
Here’s how tax filing software can help:- Automatic Income and Expense Tracking:
- Machine learning lets income and expenses reported on tax software sync with your Amazon seller account. This also involves computations which would otherwise be done manually or other important financial aspects which can easily be neglected.
- Simplified Deduction Calculations:
- Identifying and calculating deductions, such as shipping costs, Amazon FBA fees, and professional services, becomes much easier. The software helps to identify possible deductions and one would not miss the best chance of saving his or her cash.
- Seamless Form Generation:
- Filing forms like Schedule C and state sales tax reports can be daunting. These forms are prepared by tax filing software making the process less erroneous and legal compliant.
- State Tax Management:
- For sellers managing sales in multiple states, tax filing software helps track where you have a Sales Tax Nexus by State and calculates the taxes owed in each location. It is most advantageous for the FBA sellers who have their inventory located in different regions of Amazon warehouses.
- Time and Error Reduction:
- The time used in preparing taxes and hoping to discover that you have calculated on the wrong line is greatly decreased by the use of tax software.
These tools are particularly important for sellers who have thousands of products in their stock, an immense variety of products in stores, or stores in different states.
As you may know, there are many different programs available to help with taxes so even when using the software, there could still be situations that require a professional, and that leads us to the second choice.
Consulting a Tax Accountant?
For Amazon sellers with complex businesses, hiring a tax accountant for Amazon sellers can be a game-changer.
Though there are programs that can perform basic arithmetic operations, an accountant offers her opinion on how to deal with taxes, and keep you away from trouble with the law on this aspect.
Here’s why hiring a professional can be a smart investment:- Compliance with Tax Laws:
- Tax accountants always monitor the federal and state of tax laws to guarantee that the taxes you pay meet the legal procedures. They also help you understand how changes in laws, such as updates to Marketplace Tax Collection, might impact your business.
- Maximizing Deductions:
- A professional can advise you in respect to other deductions of which, perhaps, you were not aware of for instance depreciation of equipment or home office expending. They’ll also ensure you understand what is a deductible and how to leverage it fully.
- Custom Tax Strategies:
- Tax consultants analyze your business requirements, and advise you on tax planning and minimization. They can provide advice on managing Amazon FBA taxes, understanding nexus rules, and navigating complex sales tax situations.
- Audit Support:
- Having an accountant is particularly important if, at some time in the future, your business is subjected to an audit. They will help you with it, order for your documents and represent your interests to the tax authority.
For small businesses or new sellers, using tax filing software might suffice. But when you are already a business owner, tax accountant advice can really be beneficial for you and your wallet.
Making Tax Season as Easy as ABC
Anyone still wondering how to file taxes when they are an Amazon seller need not worry anymore.
If managed properly, you can be certain about compliance, acquire the maximum allowable deductions, and maintain operations. Whether you choose tax filing software, a professional accountant, or a combination of both, staying organized and informed is the key.
Most of the time, sellers need not complicate their finances and there are simple yet powerful mechanisms like Profit Cyclops which may give you an idea of how much you are actually making and how much you are spending thus enabling you to make the right decisions when it comes to tax issues.
So, even if you do not have an assistant to help you out in the preparation of data for tax returns, it becomes relatively easy to have stress-free / error-free tax returns done.
Experience the control of your financial future with your Amazon business right now. It’s a way that every dollar not spent on taxes is a dollar that can be invested back into the expansion of your company!